PhD in Biology, California Institute of Technology
B.S. in Physics, National Taiwan University
Most cell types express a variety of ion channels that serve important physiological functions, such as neuronal signaling, regulation of heartbeat and vascular tone, control of ion flow across epithelia, regulation of secretion from exocrine glands, and control of hormone release from endocrine tissues. Molecular identification of these ion channels makes it possible to study one channel type at a time. It enables functional studies of heterologously expressed channels that can be subjected to mutagenesis in order to identify structural elements important for specific aspects of the channel function. It allows the generation of specific probes to examine the localization of channel protein and the mRNA encoding the channel and to elucidate mechanisms for channel regulation in vivo. It also makes it possible to modify the channel gene genetically to test for its physiological roles.
Given the heterogeneity and broad expression of potassium channels and calcium-activated chloride channels, we resorted to performing Drosophila chromosome walk or expression cloning using frog oocytes or axolotl oocytes as the expression system, for the initial molecular identification of founding members of voltage-gated potassium channels (1987), inwardly rectifying potassium channels (1993) and calcium-activated chloride channels (2008). Once these ion channels were molecularly identified, we asked how these channels work, how transmitter actions and second messengers may regulate channel activity, and how these channels fulfill their physiological functions.
One advantage in channel studies is the possibility of examining one channel at a time, with submillisecond resolution, for many seconds, in experimentally determined intracellular and extracellular environments. In addition to conducting biophysical, biochemical, and cell biological studies of channel assembly, trafficking, regulation, and function, we need to learn how these channels are targeted to specific subcellular compartments of a neuron, how they respond dynamically to neuronal activity, and how these channels in turn modulate neuronal signaling.
Potassium Channels
Conserved among eukaryotes and prokaryotes, potassium channels modulate neuronal signaling in the brain and the peripheral nervous system, regulate cell volume and the flow of salt across epithelia, and control heart rate, vascular tone, and the release of hormones such as insulin. Furthermore, they protect neurons and muscles under metabolic stress.
Potassium channel mutations are linked to diseases of the brain (epilepsy, episodic ataxia), ear (deafness), heart (arrhythmia), muscle (myokymia, periodic paralysis), kidney (hypertension), pancreas (hyperinsulinemic hypoglycemia, neonatal diabetes), as well as developmental abnormalities of neural crest-derived tissues (Andersen's syndrome). Not only do mutations that increase or decrease potassium channel activity cause diseases, but alteration of potassium channel expression levels could also have a strong impact. For example, our recent study revealed that increased expression of EAG2 potassium channels in medulloblastoma (MB) facilitates the volume reduction known as premitotic cytoplasmic condensation that is essential for cells to proceed with mitotic cell division, thereby promoting MB cell proliferation and malignant tumor growth. Moreover, midlife obesity involves an increase in ATP-sensitive potassium channel activity in specific hypothalamic neurons known as the pro-opiomelanocortin (POMC) neurons, thereby reducing both the neuronal excitability and the release of peptides crucial for controlling food intake and body weight.
Calcium-Activated Chloride Channels
Calcium-activated chloride channels (CaCCs) also serve a broad range of physiological functions by regulating the electrical potential across the cell membrane and the flow of salt and water across epithelia. In the nervous system, these chloride channels may regulate neuronal excitability and synaptic efficacy. In the exocrine gland, CaCCs regulate secretion. In the smooth muscle, calcium release from the internal store will activate CaCCs, leading to membrane potential changes that open calcium channels to sustain smooth muscle contraction. In the digestive system, TMEM16A in the interstitial cells of Cajal regulates rhythmic contraction of the stomach and intestines. In the airway, TMEM16A is highly expressed in the airway smooth muscle (ASM), and the TMEM16A protein level on the luminal surface of airway epithelia is elevated in asthma models. In such asthma models, newly identified CaCC channel blockers reduce mucin secretion and ASM contraction, suggesting that CaCC blockers may be of therapeutic value. In green algae and plants that lack voltage-gated sodium channels, electric signal generation may depend on CaCCs.
While in most cell types the internal chloride concentration is fairly high, so that, for example, CaCCs could generate action potentials in green algae and provide positive feedback regulation to sustain smooth muscle contraction, most central neurons in the adult brain have lower internal chloride concentration, so that chloride channel activation causes inhibition. The internal chloride level may rise, however, in central neurons that have experienced heightened neuronal activity or have been subjected to pathological conditions such as epilepsy or brain trauma. Hence, not only is CaCC activity regulated by calcium entry through NMDA receptors or voltage-gated calcium channels, but also the nature of the CaCC modulation may vary qualitatively because of alterations of the chloride concentration gradient by excessive neuronal activity.
Having shown that TMEM16A and TMEM16AB give rise to CaCCs in frogs and mammals, we found that a member of the Drosophila TMEM16 family forms CaCCs that are important for host defense. Identifying an evolutionarily distant TMEM16 homolog as a CaCC will aid our structure-function studies of this ion channel, which bears no structural similarity to other channel families.
Other Types of Ion Channels in the TMEM16 Family
It is remarkable that the TMEM16 family of transmembrane proteins with unknown function includes not only channels that permeate negatively charged ions but also closely related channels that permeate positively charged ions. While TMEM16A and TMEM16B give rise to CaCCs that allow chloride ions to go through, TMEM16F forms a small-conductance calcium-activated nonselective cation channel (SCAN) that permeates calcium. TMEM16F is linked to the Scott syndrome, a bleeding disorder arising from a deficiency in calcium-activated lipid scrambling that exposes phosphatidylserine on the surface of blood cells to trigger blood coagulation. We found that mice lacking TMEM16F recapitulate this deficiency in blood coagulation.
Unexpectedly, our study revealed that TMEM16C facilitates the sodium-activated potassium channel activity in small dorsal root ganglion (DRG) neurons to modulate the excitability of these sensory neurons and pain sensitivity. TMEM16C forms a complex with the Slack sodium-activated potassium channel to enhance its sodium sensitivity. Genetic deletion of TMEM16C causes a reduction of Slack protein level and sodium-activated potassium current in nonpeptidergic nociceptive DRG neurons, leading to hyperexcitability of these small DRG neurons and heightened pain sensitivity.
- Yang, H., Kim, A., David, T., Palmer, D., Jin, T., Tien, J., Huang, F., Cheng, T., Coughlin, S.R., Jan, Y.N. and Jan, L.Y. (2012) TMEM16F forms a Ca2+-activated cation channel required for lipid scrambling in platelets during blood coagulation. Cell 151:111-122. PMCID: PMC3582364.
- Huang, F., Wang, X., Ostertag, E.M., Nuwal, T., Huang, B., Jan, Y.N., Basbaum, A.I., and Jan, L.Y. (2013) TMEM16C facilitates Na+-activated K+ currents in rat sensory neurons and regulates pain processing. Nat. Neurosci. 16:1284-1290. PMCID: PMC4034143.
- Huang, X., He, Y., Dubuc, A.M., Hashizume, R., Zhang, W. Reimand, J., Yang, H., Wang, T.A., Stehbens, S.J., Younger, S., Barshow, S., Cooper, M.K., Peacock, J., Ramaswamy, V., Garzia, L., Wu, X., Remke, M., Forester, C.M., Kim, C.C., Weiss, W.A., James, C.D., Shuman, M.A., Bader, G.D., Mueller, S., Taylor, M.D., Jan, Y.N., and Jan, L.Y. (2015). EAG2 potassium channel with evolutionarily conserved function as a brain tumor target. Nat. Neurosci. 18:1236-1246. PMCID: PMC4639927.
- Dang, S., Feng, S., Tien, J., Peters, C.J., Bulkley, D., Lolicato, M., Zhao, J., Zuberbuehler, K., Ye, W., Qi, L., Chen, T., Craik, C.S., Jan, Y.N., Minor, D., Cheng, Y., and Jan, L.Y. (2017). Cryo-EM structures of the TMEM16A calcium-activated chloride channel. Nature 552:426-429. PMCID: PMC5750132.
- Peters, C.J., Gilchrist, J.M., Tien, J., Bethel, N.P., Qi, L., Chen, T., Wang, L., Jan, Y.N., Grabe, M., and Jan, L.Y. (2018). The sixth transmembrane segment is a major gating component of the TMEM16A calcium-activated chloride channel. Neuron 97:1063-1077. PMCID: PMC5860080.
- Wang, T.A., Teo, C.F., Akerblom, M., Chen, C., Tynan-La Fontaine, M., Greiner, V.J., Diaz, A., McManus, M.T., Jan, Y.N., and Jan, L.Y. (2019) Thermoregulation via temperature-dependent PGD2 production in mouse preoptic area. Neuron 103:309-322. PMID: 31151773.
- Feng, S., Dang, S., Han, T.W., Ye, W., Jin, P., Cheng, T., Li, J., Jan, Y.N., Jan, L.Y., and Cheng, Y. (2019) TMEM16F calcium-activated ion channel suggest features important for lipid scrambling. Cell Reports 28:567-579. PMCID: PMC66848876.
- Crottés, D., Lin, Y.H.T., Peters, C.J., Gilchrist, J.M., Wiita, A.P., Jan, Y.N., and Jan, L.Y. (2019) TMEM16A controls EGF-induced calcium signaling implicated in pancreatic cancer prognosis. PNAS 116:13026-13035. PMCID: PMC6600921.
- Wang, L., Simms, J., Peters, C.J., Tynan-La Fontaine, M., Li, K., Gill, T.M., Jan, Y.N., and Jan, L.Y. (2019) TMEM16B calcium-activated chloride channels regulate action potential firing in lateral septum and aggression in male mice. Journal of Neuroscience 3137-18. PMID: 31320449.
- Li, K.X., He, M., Ye, W., Simms, J., Gill, M., Xiang, X., Jan, Y.N., and Jan, L.Y. (2019) TMEM16B regulates anxiety-related behavior and GABAergic neuronal signaling in the central lateral amygdala. eLife 8:e47106.
Lily Jan earned her undergraduate degree in Physics from National Taiwan University before pursuing a PhD in Biology at California Institute of Technology. She completed subsequent postdoctoral research at both Caltech and Harvard Medical School before joining the Physiology Department and Neuroscience program at UCSF.
Dr. Jan has received numerous accolades including Society of Chinese Bioscientists in America Presidential Award, Edward M. Scolnick Prize in Neuroscience, Wiley Price in Biomedical Sciences, and a Gruber Neuroscience Prize.